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Plotting tools

Three tools

Your data stays in your browser: files are read and plotted on your device, never uploaded to any server, and cleared when you close the page. Free, no sign-in.

Processed locally, nothing uploaded

Volcano plot maker

Turn a differential expression table into a volcano plot: adjustable padj and log2FC thresholds, live up/down counts and gene labels.

Processed locally, nothing uploaded

Expression heatmap maker

Gene × sample matrix to heatmap: row z-scores, average-linkage clustering, colour-blind-safe palettes and raw values on hover.

Processed locally, nothing uploaded

Enrichment bubble plot

Enrichment results to bubble plot: terms on the y-axis, gene ratio on the x-axis, size for gene count, colour for adjusted P.

Sample deliverables

Interactive sample reports

Interactive versions of the three public-data samples: hover for values, adjust thresholds and colours, sort and filter tables, export charts.

Interactive report

Bulk RNA-seq differential expression

Public data GSE147507: PCA, a volcano plot with adjustable thresholds linked to the gene table, top-30 heatmap and Hallmark enrichment.

Open the interactive report
Interactive report

Single-cell RNA-seq

Public data 10x PBMC 10k v3: UMAP of 11,037 cells with cell types you can toggle, cell-type proportions and the cluster annotation table.

Open the interactive report
Interactive report

Bacterial variant calling

Public data SRR2584866: read depth along the genome, variant types and substitution spectrum, and all HIGH-impact variants.

Open the interactive report

See the sample reports page (PDF, HTML and deliverable downloads)

FAQ

About these tools

Is my data uploaded?
No. Files are read by your browser on your computer and the chart is drawn locally; the page sends none of your data to any server.
Can I use the exported charts in a paper?
Yes. SVG is a vector format you can keep editing in Illustrator, Inkscape and similar software; PNG is exported at twice the screen resolution. State the thresholds and methods in the figure legend.
How large can the file be?
It depends on your browser’s memory. Differential expression tables with tens of thousands of rows plot smoothly; above 5,000 points the chart switches to canvas drawing.
What if I need the full analysis and a publication figure set?
Send us your data and research question. We start with a written plan covering analysis steps, deliverables and timeline, and begin once you confirm.

Need a full analysis?

Send us your data and research question and you will receive a written plan within 1 working day: analysis steps, parameter rationale, deliverables and timeline. Quoted per project.